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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887039.1_cds_XP_016441339.1_36712
CDS Infomation

[gene=LOC107766941] [db_xref=GeneID:107766941] [protein=E3 ubiquitin-protein ligase MBR2-like] [protein_id=XP_016441339.1] [location=complement(join(98739..98870,99402..99545,99615..99710,100388..100438,100950..102692))] [gbkey=CDS]
Sequence

ATGCAAAGGGACAGAAGTATCTTGGATTCCTTTCCAGAGACTATTGATCTTAATCAGGGA
TTGATTTCTAATAATGCTTCCATGGATCAGACAGCTCCTTGGGATAGCTTTCTGAATCCA
GTAGAGAATCGGTTGTCAAATTCCATGCTTCCTTCCGCTGGAGGAAATCCTAGTTATGCT
AATGGTGTTAACTATAATGCTCAAAGGTTTAGTAATTGGGATCAAGGTGAGTCCAGCTCC
ACTGCTAATTTGCATGACCGCATATGTGGCAGTGACTTGAAAAGAGGACAAGGTTGGCCT
TCTTCATCTAATGATTATGCTATGACAAATTCAAGGTCCGAATGGCAATTTGAACCTTCA
AACGTCTTTCCTGCAAGTGGTTATGGTGGCAATCGTCTTATTGGCAGGCCTCCTAGTATA
TCAACAAGCCTTGCCTCGGATCATAGTCCGGTAAATGCTAATTTAAGTGGTAGATACAAT
AATGATGATGGTCGGCTGGTCATGCGAACAAGTGTACCTCCACTTGTTTACAAATTTGAC
AGGTCAGAAGTGGAGCGTCCTCCGGCTTTTGGTGCATCTGATGATAATGGTACCTCTTCA
GGTAGTTCTGGTTATTTGGCAGGGACCAGTAATATATCAGGTTCATCTGTGGATAATTGG
GGTTTATCCTGCAAGAGCAAGTCCCTTGAAGGAACTTCTGGACAGTCTTTTCTAGGTGGA
AGTTCAAGCTCCAATGCAGGACATGAGAACATTGTACAGGATAACCATCCTAGTCGTTAT
AATGCTTCTAGCAGCTTAAACATTTCATCCCCTGCTGCAAATATGCAGAATGCTGGTTAT
CTGGAAAATCTTAATCCAAGAAATGGGGTTGGTACAAGTATATCTGCTTCTGATATATTT
CCTCCTTTAAGTGCTGGTGGAGTTGCAGAAAGCTCTGCCAGAAATTTTTGTGTTAGAGCA
AATCCTGCGAATCAGGGTCACACTACATTTGGTTTACCACCTATTGGGACTCCACCAATT
GGGACTACTGCAGGGCAATCTAGTGTCAGCCCCGCCCATGTGCGACCTGGACCTACCTCA
GTAACTAGCTCTTCGGAATCGAGACAGCCATTTTCACTGCCAATGAATTCAGGTAACCTT
GGAAGCCAGTCTCACATGATGCATGTTCCTGGTCCTTCAAGAGGCTTGCACTCACTTCCG
TGGGATGTATCTCCTAGTTCACGAGGTGGTAGTTTATCAATGATTTCTGGAGATAGATGT
GCTGCATCTGGAGATGAAGCTAACTTCAGTACTATCAGAAATAATGGGGAGTCCCATCCA
TTTGTTCCTGTTCCTGAGACAAGAAATATGGTACTTGACCCCACAAATTGGAGCTTAGCT
ACTGCAAATGCAAGCTCTTCTAGAAACAGTCCTAGTTCTGCAGTTGGTCCTGGTTCAAGC
GGACACAATTCTCCTACTGCATGGACTAATCCAAACTCAGCAACTACTAGCCATCATAGA
TTACCAGAATTTGCTCCTTGGATTCTCTTCCCACCAGTTGAGCCCGAGTCTGGAAGTCAG
AGAGGTCATTTTTCTCTGCTGCCTTCGGCTCCTTCTTCCTCAGAGGATCCAGTGATGTCT
TCCCGATCTAGTAGCCGTGGTATCCGTCAGCCACGTTTTAGATCAAGTTTGATGGTTGAT
CCAGGTGATGATGTGGATGGTTGGCGTGCTTTAGCTGCTGATGTTGAGGGTCGACACAGA
CTGATTCGTCAAGTCCTGAATGCCATGCGGAGGGTCGAAAACTTGCGATCGGAGGATTAT
ATGTTGGGTGATCCTTTTATCAATGGAGTTGCTGAGTTCCATGATAGGCATAGAGACATG
AGGCTCGATGTTGATAACATGTACTATGAGGAACTATTGGCATTGGAAGAACGTATAGGA
AATGTAAACACAGGCTTGACTGAAGAAACCATTTGGGTCAATATGAAACAGCGGAAGCAC
GAGTCTGTATATGGACGATCCTCATCAAACTTGGAGCCATGCTGTATATGTCAGGAGGAA
TACAAAGCTGGAGATATCATGGGCATGTTGGATTGTGGGCATGAATTCCACACTAACTGC
ATTAAGCAGTGGTTAGTGCTGAAGAATATCTGTCCCATATGTAAGACGACTGCGTTGAAA
ACTTGA

Peptide Sequence

PEP ID

XP_016441339.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase MBR2-like [Nicotiana tabacum]
Sequence

MQRDRSILDSFPETIDLNQGLISNNASMDQTAPWDSFLNPVENRLSNSMLPSAGGNPSYA
NGVNYNAQRFSNWDQGESSSTANLHDRICGSDLKRGQGWPSSSNDYAMTNSRSEWQFEPS
NVFPASGYGGNRLIGRPPSISTSLASDHSPVNANLSGRYNNDDGRLVMRTSVPPLVYKFD
RSEVERPPAFGASDDNGTSSGSSGYLAGTSNISGSSVDNWGLSCKSKSLEGTSGQSFLGG
SSSSNAGHENIVQDNHPSRYNASSSLNISSPAANMQNAGYLENLNPRNGVGTSISASDIF
PPLSAGGVAESSARNFCVRANPANQGHTTFGLPPIGTPPIGTTAGQSSVSPAHVRPGPTS
VTSSSESRQPFSLPMNSGNLGSQSHMMHVPGPSRGLHSLPWDVSPSSRGGSLSMISGDRC
AASGDEANFSTIRNNGESHPFVPVPETRNMVLDPTNWSLATANASSSRNSPSSAVGPGSS
GHNSPTAWTNPNSATTSHHRLPEFAPWILFPPVEPESGSQRGHFSLLPSAPSSSEDPVMS
SRSSSRGIRQPRFRSSLMVDPGDDVDGWRALAADVEGRHRLIRQVLNAMRRVENLRSEDY
MLGDPFINGVAEFHDRHRDMRLDVDNMYYEELLALEERIGNVNTGLTEETIWVNMKQRKH
ESVYGRSSSNLEPCCICQEEYKAGDIMGMLDCGHEFHTNCIKQWLVLKNICPICKTTALK
T

Transcript Sequence

Gene sequence data has not been registered.